Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Gm23119-201ENSMUST00000158610 140 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Gm9996-201ENSMUST00000070359 913 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.27■□□□□ 0.2
Rab11fip3Q8CHD8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rab11fip3Q8CHD8 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.27■□□□□ 0.19
Rab11fip3Q8CHD8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rab11fip3Q8CHD8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm14028-201ENSMUST00000117434 479 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm4909-201ENSMUST00000118749 794 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm14760-201ENSMUST00000121831 999 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm19208-201ENSMUST00000213861 912 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm26035-201ENSMUST00000083065 308 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rab11fip3Q8CHD8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm14277-201ENSMUST00000121195 360 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Rps4l-202ENSMUST00000204242 789 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rab11fip3Q8CHD8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms