Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccdc28bQ8CEG5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Gm29667-201ENSMUST00000190817 490 ntBASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc28bQ8CEG5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Gm15371-201ENSMUST00000117057 784 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Gm6736-201ENSMUST00000166583 948 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28bQ8CEG5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28bQ8CEG5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms