Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Gm6091-201ENSMUST00000098307 165 ntBASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.02□□□□□ -0.16
Ccdc38Q8CDN8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc38Q8CDN8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Gm27839-201ENSMUST00000184242 106 ntBASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Gm38092-201ENSMUST00000195600 653 ntBASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc38Q8CDN8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Gm26927-201ENSMUST00000182385 965 ntBASIC14□□□□□ -0.17
Ccdc38Q8CDN8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms