Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vcpip1Q8CDG3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vcpip1Q8CDG3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.52□□□□□ -0.25
Vcpip1Q8CDG3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm13369-201ENSMUST00000119442 987 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm37424-201ENSMUST00000191727 561 ntBASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Vcpip1Q8CDG3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms