Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Gm38223-201ENSMUST00000194484 695 ntBASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lrif1Q8CDD9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lrif1Q8CDD9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm17150-201ENSMUST00000165577 381 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lrif1Q8CDD9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm6244-201ENSMUST00000178732 841 ntBASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lrif1Q8CDD9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms