Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pabpn1Q8CCS6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Gm43721-201ENSMUST00000199677 2313 ntBASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pabpn1Q8CCS6 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Gm18711-201ENSMUST00000199341 750 ntBASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Gm6450-201ENSMUST00000200896 574 ntBASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Gm6108-201ENSMUST00000208365 367 ntBASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Gm26670-202ENSMUST00000226862 340 ntBASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pabpn1Q8CCS6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm26513-201ENSMUST00000181802 2489 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm25562-201ENSMUST00000104608 133 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm25554-201ENSMUST00000158075 113 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm2448-201ENSMUST00000207080 559 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 AC152169.1-201ENSMUST00000223901 701 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Gm5780-201ENSMUST00000217774 1834 ntBASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pabpn1Q8CCS6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm23769-201ENSMUST00000104441 121 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm12736-201ENSMUST00000119330 236 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm20694-201ENSMUST00000176943 404 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 AC129975.1-201ENSMUST00000224816 592 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 AC112945.1-201ENSMUST00000226413 514 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm23105-201ENSMUST00000083719 134 ntBASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC19.06■□□□□ 0.64
Pabpn1Q8CCS6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pabpn1Q8CCS6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms