Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm18473-201ENSMUST00000220543 868 ntBASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lysmd4Q8CC84 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lysmd4Q8CC84 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Gm20949-201ENSMUST00000206478 952 ntBASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.27□□□□□ -0.61
Lysmd4Q8CC84 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm16296-201ENSMUST00000159905 325 ntBASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm16215-201ENSMUST00000161990 637 ntBASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm22121-201ENSMUST00000175148 54 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms