Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa4Q8CA71 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm15547-201ENSMUST00000122152 333 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm22334-201ENSMUST00000158070 133 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm43947-201ENSMUST00000203019 959 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm44958-201ENSMUST00000203734 736 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa4Q8CA71 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa4Q8CA71 Gm4909-201ENSMUST00000118749 794 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm14017-201ENSMUST00000121934 386 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 AU022133-201ENSMUST00000200601 873 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa4Q8CA71 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms