Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm14724-201ENSMUST00000118400 537 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm15711-201ENSMUST00000118889 535 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm12501-201ENSMUST00000119163 529 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm12029-201ENSMUST00000120073 832 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm29155-201ENSMUST00000185910 269 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col6a6Q8C6K9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm15881-201ENSMUST00000148792 942 ntBASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm8100-201ENSMUST00000182906 988 ntBASIC11.32□□□□□ -0.6
Col6a6Q8C6K9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms