Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tsen54Q8C2A2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm15240-201ENSMUST00000118156 720 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tsen54Q8C2A2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Gm15770-201ENSMUST00000117498 584 ntBASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Gm12859-201ENSMUST00000117834 427 ntBASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Gm19220-201ENSMUST00000222682 803 ntBASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tsen54Q8C2A2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms