Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sh3rf3Q8C120 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sh3rf3Q8C120 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm12502-201ENSMUST00000120197 444 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm43433-201ENSMUST00000196573 481 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Snora73a-201ENSMUST00000082453 205 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Sh3rf3Q8C120 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms