Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm27514-201ENSMUST00000183692 110 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm5904-201ENSMUST00000210286 865 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm5781-201ENSMUST00000219792 443 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trub1Q8C0D0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm23931-201ENSMUST00000103842 109 ntBASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm13315-201ENSMUST00000120376 991 ntBASIC12.96□□□□□ -0.33
Trub1Q8C0D0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm45930-201ENSMUST00000221330 292 ntBASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trub1Q8C0D0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Trub1Q8C0D0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trub1Q8C0D0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms