Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm14028-201ENSMUST00000117434 479 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm45224-201ENSMUST00000208203 414 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sh3rf2Q8BZT2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm14208-201ENSMUST00000119645 678 ntBASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm5070-201ENSMUST00000177599 862 ntBASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Sh3rf2Q8BZT2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf2Q8BZT2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms