Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trerf1Q8BXJ2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm14660-201ENSMUST00000119809 575 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm27331-201ENSMUST00000183705 60 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm19931-201ENSMUST00000198920 368 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trerf1Q8BXJ2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trerf1Q8BXJ2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trerf1Q8BXJ2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms