Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Usp43Q8BUM9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm13736-201ENSMUST00000119272 253 ntBASIC12.73□□□□□ -0.37
Usp43Q8BUM9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Usp43Q8BUM9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp43Q8BUM9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp43Q8BUM9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp43Q8BUM9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp43Q8BUM9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp43Q8BUM9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms