Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm10312-201ENSMUST00000078515 489 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Mir433-201ENSMUST00000093564 124 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr7Q8BU04 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr7Q8BU04 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr7Q8BU04 Gm14644-201ENSMUST00000116671 647 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms