Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6bQ8BKI2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6bQ8BKI2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6bQ8BKI2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.32■□□□□ 0.2
Tnrc6bQ8BKI2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6bQ8BKI2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm14193-201ENSMUST00000105067 153 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm13937-201ENSMUST00000121000 988 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm18159-201ENSMUST00000174516 1070 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm9132-201ENSMUST00000210182 832 ntBASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnrc6bQ8BKI2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm8737-201ENSMUST00000122208 642 ntBASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnrc6bQ8BKI2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gm11956-201ENSMUST00000119525 512 ntBASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 AC165260.2-203ENSMUST00000224237 336 ntBASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnrc6bQ8BKI2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms