Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Clrn3Q8BHH8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Gm12390-201ENSMUST00000117897 397 ntBASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn3Q8BHH8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm13813-201ENSMUST00000120998 787 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm17208-201ENSMUST00000168388 535 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm22121-201ENSMUST00000175148 54 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.86□□□□□ -0.51
Clrn3Q8BHH8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clrn3Q8BHH8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms