Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Samm50Q8BGH2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Gm10268-201ENSMUST00000085340 555 ntBASIC14.76□□□□□ -0.05
Samm50Q8BGH2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Samm50Q8BGH2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.75□□□□□ -0.05
Samm50Q8BGH2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Gm5370-201ENSMUST00000187187 574 ntBASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Samm50Q8BGH2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm2231-201ENSMUST00000125661 612 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm8062-201ENSMUST00000139696 444 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Samm50Q8BGH2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.73□□□□□ -0.05
Samm50Q8BGH2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms