Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Usp6nlQ80XC3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.9□□□□□ -0.19
Usp6nlQ80XC3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Usp6nlQ80XC3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm13611-201ENSMUST00000118269 318 ntBASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm37835-201ENSMUST00000193305 361 ntBASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Usp6nlQ80XC3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm9062-201ENSMUST00000117712 727 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm13461-201ENSMUST00000120980 662 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm9555-201ENSMUST00000200908 583 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gm19994-201ENSMUST00000217086 586 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms