Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Gm44405-201ENSMUST00000198952 126 ntBASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Gm44545-201ENSMUST00000208262 746 ntBASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm14109-201ENSMUST00000118814 309 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm8885-201ENSMUST00000189382 598 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Gm45770-201ENSMUST00000212105 616 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prpf40bQ80W14 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gm9211-201ENSMUST00000182882 975 ntBASIC14.54□□□□□ -0.08
Prpf40bQ80W14 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gm32025-201ENSMUST00000217960 307 ntBASIC14.54□□□□□ -0.08
Prpf40bQ80W14 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prpf40bQ80W14 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prpf40bQ80W14 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms