Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.65□□□□□ -0.38
Usp8Q80U87 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm8213-201ENSMUST00000118191 441 ntBASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm14928-201ENSMUST00000120198 477 ntBASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.65□□□□□ -0.38
Usp8Q80U87 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Proscos-202ENSMUST00000178990 666 ntBASIC12.65□□□□□ -0.38
Usp8Q80U87 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp8Q80U87 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.65□□□□□ -0.39
Usp8Q80U87 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.64□□□□□ -0.39
Usp8Q80U87 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.64□□□□□ -0.39
Usp8Q80U87 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm6745-201ENSMUST00000199216 526 ntBASIC12.64□□□□□ -0.39
Usp8Q80U87 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm9908-201ENSMUST00000211534 448 ntBASIC12.64□□□□□ -0.39
Usp8Q80U87 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.64□□□□□ -0.39
Usp8Q80U87 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp8Q80U87 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Usp8Q80U87 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp8Q80U87 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms