Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf38bQ80SY5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gm44551-201ENSMUST00000208804 171 ntBASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Prpf38bQ80SY5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm12403-201ENSMUST00000121384 959 ntBASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm11597-201ENSMUST00000121423 964 ntBASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Prpf38bQ80SY5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gm26361-201ENSMUST00000158868 186 ntBASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms