Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gm27501-201ENSMUST00000183599 107 ntBASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gm43179-201ENSMUST00000198797 275 ntBASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Timd4Q6U7R4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Mir8109-201ENSMUST00000184375 117 ntBASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Olfr284-202ENSMUST00000206647 966 ntBASIC11.71□□□□□ -0.53
Timd4Q6U7R4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gm22058-201ENSMUST00000083393 310 ntBASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Timd4Q6U7R4 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Timd4Q6U7R4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm24231-201ENSMUST00000104315 133 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm11964-201ENSMUST00000120982 444 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm13786-201ENSMUST00000122371 333 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm27516-201ENSMUST00000184237 98 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm42627-201ENSMUST00000197347 224 ntBASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Timd4Q6U7R4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms