Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.13□□□□□ -0.31
Ccdc85bQ6PDY0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85bQ6PDY0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85bQ6PDY0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85bQ6PDY0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm14999-201ENSMUST00000121039 624 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm14832-201ENSMUST00000121289 322 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85bQ6PDY0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm12015-201ENSMUST00000117065 843 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm23363-201ENSMUST00000175024 79 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm42779-201ENSMUST00000198807 406 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm9463-201ENSMUST00000206707 601 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85bQ6PDY0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms