Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcc2Q6PDG5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm42627-201ENSMUST00000197347 224 ntBASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm18584-201ENSMUST00000203098 964 ntBASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcc2Q6PDG5 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.67□□□□□ -0.06
Smarcc2Q6PDG5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm11964-201ENSMUST00000120982 444 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm3890-201ENSMUST00000182416 207 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm43118-201ENSMUST00000199149 775 ntBASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcc2Q6PDG5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms