Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Gm23680-201ENSMUST00000083162 164 ntBASIC13.43□□□□□ -0.26
ShbQ6PD21 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ShbQ6PD21 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShbQ6PD21 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.42□□□□□ -0.26
ShbQ6PD21 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.42□□□□□ -0.26
ShbQ6PD21 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.42□□□□□ -0.26
ShbQ6PD21 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ShbQ6PD21 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.42□□□□□ -0.26
ShbQ6PD21 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ShbQ6PD21 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm26989-201ENSMUST00000182608 749 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Mir6407-201ENSMUST00000184510 101 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm18460-201ENSMUST00000208088 464 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm45500-201ENSMUST00000211676 803 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.41□□□□□ -0.26
ShbQ6PD21 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.41□□□□□ -0.26
ShbQ6PD21 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ShbQ6PD21 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ShbQ6PD21 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ShbQ6PD21 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShbQ6PD21 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.4□□□□□ -0.26
ShbQ6PD21 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShbQ6PD21 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
ShbQ6PD21 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShbQ6PD21 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShbQ6PD21 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShbQ6PD21 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ShbQ6PD21 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ShbQ6PD21 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms