Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm38671-201ENSMUST00000200573 130 ntBASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm44124-201ENSMUST00000204159 472 ntBASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm8463-201ENSMUST00000208573 613 ntBASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smarcd3Q6P9Z1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm27701-201ENSMUST00000184498 110 ntBASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smarcd3Q6P9Z1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smarcd3Q6P9Z1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms