Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 AC169036.1-201ENSMUST00000227994 296 ntBASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slx4Q6P1D7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm14219-201ENSMUST00000120414 288 ntBASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm4654-201ENSMUST00000183305 982 ntBASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Gm2875-201ENSMUST00000211333 360 ntBASIC19.02■□□□□ 0.63
Slx4Q6P1D7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Gm43267-201ENSMUST00000199664 1796 ntBASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Gm9645-201ENSMUST00000197131 792 ntBASIC19.01■□□□□ 0.63
Slx4Q6P1D7 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 AC140375.1-201ENSMUST00000225421 694 ntBASIC19.01■□□□□ 0.63
Slx4Q6P1D7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slx4Q6P1D7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Gm29499-201ENSMUST00000189151 486 ntBASIC19■□□□□ 0.63
Slx4Q6P1D7 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slx4Q6P1D7 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Gm28329-201ENSMUST00000191208 689 ntBASIC19■□□□□ 0.63
Slx4Q6P1D7 Gm29171-201ENSMUST00000191397 486 ntBASIC19■□□□□ 0.63
Slx4Q6P1D7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC19■□□□□ 0.63
Slx4Q6P1D7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC19■□□□□ 0.63
Slx4Q6P1D7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slx4Q6P1D7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm5419-201ENSMUST00000119301 527 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 n-R5s84-201ENSMUST00000122591 109 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm24844-201ENSMUST00000158679 127 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm4310-201ENSMUST00000177847 889 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm12407-201ENSMUST00000180219 324 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Gm45643-201ENSMUST00000211364 1484 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slx4Q6P1D7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC18.98■□□□□ 0.63
Slx4Q6P1D7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms