Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sp140Q6NSQ5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm6222-202ENSMUST00000182143 629 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm6266-201ENSMUST00000203844 806 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sp140Q6NSQ5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Gm11964-201ENSMUST00000120982 444 ntBASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sp140Q6NSQ5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sp140Q6NSQ5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms