Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm7287-201ENSMUST00000205267 602 ntBASIC13.9□□□□□ -0.18
Krt39Q6IFX4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt39Q6IFX4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm11803-201ENSMUST00000119966 444 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm8810-201ENSMUST00000172895 754 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm17794-201ENSMUST00000220252 955 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt39Q6IFX4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm16296-201ENSMUST00000159905 325 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm6244-201ENSMUST00000178732 841 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm8099-201ENSMUST00000200510 742 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt39Q6IFX4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms