Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm13786-201ENSMUST00000122371 333 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm5781-201ENSMUST00000219792 443 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm8227-201ENSMUST00000223306 571 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm24526-201ENSMUST00000082921 158 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.14□□□□□ -0.47
Sdc3Q64519 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sdc3Q64519 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sdc3Q64519 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.13□□□□□ -0.47
Sdc3Q64519 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Mospd4-201ENSMUST00000180618 576 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm6621-201ENSMUST00000193251 772 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm45865-201ENSMUST00000211815 945 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.13□□□□□ -0.47
Sdc3Q64519 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sdc3Q64519 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sdc3Q64519 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.13□□□□□ -0.47
Sdc3Q64519 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.12□□□□□ -0.47
Sdc3Q64519 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sdc3Q64519 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sdc3Q64519 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.12□□□□□ -0.47
Sdc3Q64519 Gm13316-201ENSMUST00000140537 691 ntBASIC12.12□□□□□ -0.47
Sdc3Q64519 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms