Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rai1Q61818 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12□□□□□ -0.49
Rai1Q61818 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12□□□□□ -0.49
Rai1Q61818 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rai1Q61818 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Gm12857-201ENSMUST00000117678 592 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Gm15573-201ENSMUST00000119487 540 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rai1Q61818 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.99□□□□□ -0.49
Rai1Q61818 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.99□□□□□ -0.49
Rai1Q61818 Gm9463-201ENSMUST00000206707 601 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rai1Q61818 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rai1Q61818 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.99□□□□□ -0.49
Rai1Q61818 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rai1Q61818 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Gm14724-201ENSMUST00000118400 537 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rai1Q61818 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rai1Q61818 Gm8100-201ENSMUST00000182906 988 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Gm17931-201ENSMUST00000208132 634 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Gm9797-202ENSMUST00000218003 294 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.98□□□□□ -0.49
Rai1Q61818 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rai1Q61818 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rai1Q61818 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Gm22144-201ENSMUST00000157402 102 ntBASIC11.97□□□□□ -0.49
Rai1Q61818 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.97□□□□□ -0.49
Rai1Q61818 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.97□□□□□ -0.49
Rai1Q61818 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rai1Q61818 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rai1Q61818 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rai1Q61818 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rai1Q61818 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rai1Q61818 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms