Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Gm11531-201ENSMUST00000117614 555 ntBASIC12.68□□□□□ -0.38
Six4Q61321 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.68□□□□□ -0.38
Six4Q61321 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.68□□□□□ -0.38
Six4Q61321 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Six4Q61321 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Gm18304-201ENSMUST00000189162 546 ntBASIC12.68□□□□□ -0.38
Six4Q61321 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.68□□□□□ -0.38
Six4Q61321 Gm37201-201ENSMUST00000191845 523 ntBASIC12.68□□□□□ -0.38
Six4Q61321 Gm37489-201ENSMUST00000191883 159 ntBASIC12.68□□□□□ -0.38
Six4Q61321 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.68□□□□□ -0.38
Six4Q61321 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.68□□□□□ -0.38
Six4Q61321 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Six4Q61321 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Six4Q61321 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six4Q61321 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Six4Q61321 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Six4Q61321 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Gm25043-201ENSMUST00000158604 212 ntBASIC12.67□□□□□ -0.38
Six4Q61321 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Six4Q61321 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.67□□□□□ -0.38
Six4Q61321 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Gm6621-201ENSMUST00000193251 772 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.67□□□□□ -0.38
Six4Q61321 Gm5950-201ENSMUST00000213337 772 ntBASIC12.67□□□□□ -0.38
Six4Q61321 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Six4Q61321 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Six4Q61321 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.67□□□□□ -0.38
Six4Q61321 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
Six4Q61321 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six4Q61321 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Six4Q61321 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Six4Q61321 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six4Q61321 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms