Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm8451-201ENSMUST00000170338 447 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm7536-201ENSMUST00000077389 444 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm5453-201ENSMUST00000080866 447 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm25226-201ENSMUST00000158198 123 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.09□□□□□ -0.47
Col12a1Q60847 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm9022-201ENSMUST00000182482 992 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Col12a1Q60847 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.09□□□□□ -0.47
Col12a1Q60847 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col12a1Q60847 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.09□□□□□ -0.47
Col12a1Q60847 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col12a1Q60847 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col12a1Q60847 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.08□□□□□ -0.48
Col12a1Q60847 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm43969-201ENSMUST00000204833 535 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm18561-201ENSMUST00000206027 804 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm8342-201ENSMUST00000209839 757 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.08□□□□□ -0.48
Col12a1Q60847 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm37197-201ENSMUST00000195607 401 ntBASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.08□□□□□ -0.48
Col12a1Q60847 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col12a1Q60847 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col12a1Q60847 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col12a1Q60847 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm15620-201ENSMUST00000122949 270 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm43852-201ENSMUST00000202098 917 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.07□□□□□ -0.48
Col12a1Q60847 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col12a1Q60847 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col12a1Q60847 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.07□□□□□ -0.48
Col12a1Q60847 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col12a1Q60847 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms