Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gm44967-201ENSMUST00000207047 631 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gm18212-201ENSMUST00000211678 889 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shroom1Q5SX79 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Shroom1Q5SX79 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm14130-201ENSMUST00000118417 987 ntBASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm14109-201ENSMUST00000118814 309 ntBASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm16505-201ENSMUST00000179981 232 ntBASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm3096-201ENSMUST00000185770 364 ntBASIC13.39□□□□□ -0.27
Shroom1Q5SX79 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shroom1Q5SX79 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Gm25043-201ENSMUST00000158604 212 ntBASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Shroom1Q5SX79 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms