Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Rubie-203ENSMUST00000227803 2430 ntBASIC10.82□□□□□ -0.68
Trav5d-4Q5R1F6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm16177-201ENSMUST00000120728 718 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm1335-201ENSMUST00000121653 386 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm29127-201ENSMUST00000188304 517 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm26035-201ENSMUST00000083065 308 ntBASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav5d-4Q5R1F6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm12390-201ENSMUST00000117897 397 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm27682-201ENSMUST00000183930 110 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm43818-201ENSMUST00000200605 466 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm40466-201ENSMUST00000212174 422 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav5d-4Q5R1F6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav5d-4Q5R1F6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms