Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm29615-201ENSMUST00000185371 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28224-201ENSMUST00000186078 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm29001-201ENSMUST00000186177 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28292-201ENSMUST00000186593 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28101-201ENSMUST00000187608 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm29076-201ENSMUST00000187689 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28302-201ENSMUST00000187931 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28646-201ENSMUST00000188220 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28205-201ENSMUST00000189177 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm29032-201ENSMUST00000189797 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm28695-201ENSMUST00000190300 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm37448-201ENSMUST00000192795 697 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.59□□□□□ -0.55
Urb1Q571H0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm12291-201ENSMUST00000121627 311 ntBASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm11675-201ENSMUST00000121873 832 ntBASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.59□□□□□ -0.55
Urb1Q571H0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Urb1Q571H0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Urb1Q571H0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Urb1Q571H0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Urb1Q571H0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Urb1Q571H0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.55
Urb1Q571H0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Urb1Q571H0 Gm12165-201ENSMUST00000117047 342 ntBASIC11.58□□□□□ -0.55
Urb1Q571H0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Urb1Q571H0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Urb1Q571H0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.58□□□□□ -0.55
Urb1Q571H0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.58□□□□□ -0.56
Urb1Q571H0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Gm18893-201ENSMUST00000198416 943 ntBASIC11.58□□□□□ -0.56
Urb1Q571H0 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.58□□□□□ -0.56
Urb1Q571H0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Urb1Q571H0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Urb1Q571H0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms