Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm5070-201ENSMUST00000177599 862 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm9022-201ENSMUST00000182482 992 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm42937-201ENSMUST00000197360 752 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm44651-201ENSMUST00000207343 372 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm6963-201ENSMUST00000147879 379 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm24990-201ENSMUST00000157406 323 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm2260-201ENSMUST00000184965 657 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38aQ4FK66 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Rprl1-202ENSMUST00000198476 238 ntBASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gzmn-202ENSMUST00000225535 989 ntBASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prpf38aQ4FK66 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 816 ms