Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mir7654-201ENSMUST00000185082 70 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shisa3Q3UPR0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Gm35960-201ENSMUST00000202712 767 ntBASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Gm26226-201ENSMUST00000082509 116 ntBASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Shisa3Q3UPR0 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm13813-201ENSMUST00000120998 787 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm12138-201ENSMUST00000122180 951 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm45384-201ENSMUST00000210451 277 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm7653-201ENSMUST00000214567 508 ntBASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Shisa3Q3UPR0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms