Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1brtQ3UNC9 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm2420-201ENSMUST00000119864 2149 ntBASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm13385-201ENSMUST00000121089 220 ntBASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm7063-201ENSMUST00000186840 981 ntBASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Spcs1-207ENSMUST00000228767 1008 ntBASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1brtQ3UNC9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.99□□□□□ -0.97
Cks1brtQ3UNC9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms