Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc33Q3ULW6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Gm22058-201ENSMUST00000083393 310 ntBASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc33Q3ULW6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Gm14665-201ENSMUST00000122294 557 ntBASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Gm11978-201ENSMUST00000122315 466 ntBASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc33Q3ULW6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms