Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm9062-201ENSMUST00000117712 727 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12624-201ENSMUST00000177615 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm9211-201ENSMUST00000182882 975 ntBASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3aQ3ULJ3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm9550-201ENSMUST00000161130 862 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3aQ3ULJ3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Gm11450-201ENSMUST00000121144 333 ntBASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upf3aQ3ULJ3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upf3aQ3ULJ3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms