Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm9630-201ENSMUST00000178304 885 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm29127-201ENSMUST00000188304 517 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Brf2Q3UAW9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.85□□□□□ -0.51
Brf2Q3UAW9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm27682-201ENSMUST00000183930 110 ntBASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Brf2Q3UAW9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm12390-201ENSMUST00000117897 397 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm16177-201ENSMUST00000120728 718 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm8602-201ENSMUST00000184045 607 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm40466-201ENSMUST00000212174 422 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.84□□□□□ -0.51
Brf2Q3UAW9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms