Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.95□□□□□ -0.66
Q3U1D9 Gm14017-201ENSMUST00000121934 386 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Rmrp-201ENSMUST00000157463 271 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.95□□□□□ -0.66
Q3U1D9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Q3U1D9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Gm44967-201ENSMUST00000207047 631 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Q3U1D9 Gm18212-201ENSMUST00000211678 889 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.95□□□□□ -0.66
Q3U1D9 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Gm10312-201ENSMUST00000078515 489 ntBASIC10.95□□□□□ -0.66
Q3U1D9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Q3U1D9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.95□□□□□ -0.66
Q3U1D9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Q3U1D9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Q3U1D9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Q3U1D9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.94□□□□□ -0.66
Q3U1D9 Gm13570-201ENSMUST00000140763 309 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 AA914427-201ENSMUST00000193194 1166 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 Gm44651-201ENSMUST00000207343 372 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Gm18041-201ENSMUST00000218210 618 ntBASIC10.94□□□□□ -0.66
Q3U1D9 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Q3U1D9 Gm10076-201ENSMUST00000073238 384 ntBASIC10.94□□□□□ -0.66
Q3U1D9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Q3U1D9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Q3U1D9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.94□□□□□ -0.66
Q3U1D9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Q3U1D9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Q3U1D9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.93□□□□□ -0.66
Q3U1D9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Q3U1D9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms