Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm19994-201ENSMUST00000217086 586 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm7727-201ENSMUST00000219830 671 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 AC164099.1-201ENSMUST00000227780 333 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm11544-201ENSMUST00000120215 382 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm15815-201ENSMUST00000120569 255 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm14006-201ENSMUST00000122132 981 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm25554-201ENSMUST00000158075 113 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm24809-201ENSMUST00000175318 271 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm18776-201ENSMUST00000188833 654 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm42430-201ENSMUST00000197209 616 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.2□□□□□ -0.62
Chd8Q09XV5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd8Q09XV5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm25076-201ENSMUST00000104098 132 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm15566-201ENSMUST00000121130 590 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm14807-201ENSMUST00000116640 983 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm13117-201ENSMUST00000120894 691 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm10169-201ENSMUST00000121822 348 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Gm45575-201ENSMUST00000210283 548 ntBASIC11.19□□□□□ -0.62
Chd8Q09XV5 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd8Q09XV5 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.18□□□□□ -0.62
Chd8Q09XV5 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd8Q09XV5 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms