Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.78□□□□□ -0.36
Ebf1Q07802 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ebf1Q07802 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.78□□□□□ -0.36
Ebf1Q07802 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.78□□□□□ -0.36
Ebf1Q07802 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ebf1Q07802 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ebf1Q07802 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Ebf1Q07802 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ebf1Q07802 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Ebf1Q07802 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ebf1Q07802 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.77□□□□□ -0.36
Ebf1Q07802 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm13875-201ENSMUST00000120162 282 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 Gm38092-201ENSMUST00000195600 653 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Daam2-202ENSMUST00000224595 1926 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ebf1Q07802 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.77□□□□□ -0.37
Ebf1Q07802 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.77□□□□□ -0.37
Ebf1Q07802 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ebf1Q07802 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Gm44405-201ENSMUST00000198952 126 ntBASIC12.76□□□□□ -0.37
Ebf1Q07802 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.76□□□□□ -0.37
Ebf1Q07802 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms