Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm11597-201ENSMUST00000121423 964 ntBASIC12.39□□□□□ -0.43
Sox4Q06831 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.39□□□□□ -0.43
Sox4Q06831 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm45865-201ENSMUST00000211815 945 ntBASIC12.39□□□□□ -0.43
Sox4Q06831 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.39□□□□□ -0.43
Sox4Q06831 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.39□□□□□ -0.43
Sox4Q06831 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox4Q06831 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.39□□□□□ -0.43
Sox4Q06831 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox4Q06831 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox4Q06831 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox4Q06831 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Sox4Q06831 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.38□□□□□ -0.43
Sox4Q06831 Gm13315-201ENSMUST00000120376 991 ntBASIC12.38□□□□□ -0.43
Sox4Q06831 Rmrp-201ENSMUST00000157463 271 ntBASIC12.38□□□□□ -0.43
Sox4Q06831 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox4Q06831 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.38□□□□□ -0.43
Sox4Q06831 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.38□□□□□ -0.43
Sox4Q06831 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox4Q06831 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox4Q06831 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox4Q06831 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox4Q06831 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Sox4Q06831 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Sox4Q06831 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Sox4Q06831 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Gm44364-201ENSMUST00000198368 141 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox4Q06831 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.37□□□□□ -0.43
Sox4Q06831 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.37□□□□□ -0.43
Sox4Q06831 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sox4Q06831 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox4Q06831 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms