Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.07□□□□□ -0.64
Thbs3Q05895 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm8018-201ENSMUST00000173536 789 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm19184-201ENSMUST00000196798 928 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm45925-201ENSMUST00000218882 744 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.07□□□□□ -0.64
Thbs3Q05895 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thbs3Q05895 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.07□□□□□ -0.64
Thbs3Q05895 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm23931-201ENSMUST00000103842 109 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Mir1247-201ENSMUST00000116706 82 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm6023-201ENSMUST00000118217 606 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm9630-201ENSMUST00000178304 885 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.06□□□□□ -0.64
Thbs3Q05895 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Thbs3Q05895 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.06□□□□□ -0.64
Thbs3Q05895 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thbs3Q05895 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm12742-201ENSMUST00000117326 410 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm12957-201ENSMUST00000117835 377 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm44405-201ENSMUST00000198952 126 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.05□□□□□ -0.64
Thbs3Q05895 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Thbs3Q05895 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Thbs3Q05895 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms