Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm43818-201ENSMUST00000200605 466 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm7561-201ENSMUST00000211203 886 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.66□□□□□ -0.38
Pfdn6Q03958 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gm11424-201ENSMUST00000121929 829 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pfdn6Q03958 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.65□□□□□ -0.38
Pfdn6Q03958 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn6Q03958 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn6Q03958 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pfdn6Q03958 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Cog3-203ENSMUST00000227473 4197 ntBASIC12.64□□□□□ -0.39
Pfdn6Q03958 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms